// Copyright 2015 Georg-August-Universität Göttingen, Germany // // Licensed under the Apache License, Version 2.0 (the "License"); // you may not use this file except in compliance with the License. // You may obtain a copy of the License at // // http://www.apache.org/licenses/LICENSE-2.0 // // Unless required by applicable law or agreed to in writing, software // distributed under the License is distributed on an "AS IS" BASIS, // WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. // See the License for the specific language governing permissions and // limitations under the License. package de.ugoe.cs.cpdp.eval; import java.io.FileInputStream; import java.io.IOException; import java.sql.Connection; import java.sql.DriverManager; import java.sql.ResultSet; import java.sql.SQLException; import java.sql.Statement; import java.util.Properties; import org.apache.commons.dbcp2.BasicDataSource; import com.mysql.jdbc.jdbc2.optional.MysqlDataSource; import de.lmu.ifi.dbs.elki.logging.Logging.Level; import de.ugoe.cs.util.console.Console; /** *
* Implements a storage of experiment results in a MySQL database. *
* * @author Steffen Herbold */ public class MySQLResultStorage implements IResultStorage { /** * Connection to the database */ //private Connection con = null; /** * Connection pool for the data base. */ private MysqlDataSource connectionPool = null; /** ** Creates a new results storage. Tries to read a properties file mysql.cred located in the * working directory. If this file is not found, the default database configuration is used: *
* Sets up the database connection *
* * @param dbHost * host of the database * @param dbPort * port of the database * @param dbName * name of the database * @param dbUser * user of the database * @param dbPass * password of the user */ private void connectToDB(String dbHost, String dbPort, String dbName, String dbUser, String dbPass) { connectionPool = new MysqlDataSource(); connectionPool.setUser(dbUser); connectionPool.setPassword(dbPass); connectionPool.setUrl("jdbc:mysql://" + dbHost + ":" + dbPort + "/" + dbName); /* try { Properties connectionProperties = new Properties(); connectionProperties.put("user", dbUser); connectionProperties.put("password", dbPass); connectionProperties.put("autoReconnect", "true"); connectionProperties.put("maxReconnects", "10000"); Class.forName("com.mysql.jdbc.Driver"); con = DriverManager.getConnection("jdbc:mysql://" + dbHost + ":" + dbPort + "/" + dbName, connectionProperties); } catch (ClassNotFoundException e) { Console.printerr("JDBC driver not found"); } catch (SQLException e) { Console.printerr("Problem with MySQL connection: "); Console.printerr("SQLException: " + e.getMessage()); Console.printerr("SQLState: " + e.getSQLState()); Console.printerr("VendorError: " + e.getErrorCode()); } */ } /* * (non-Javadoc) * * @see de.ugoe.cs.cpdp.eval.IResultStorage#addResult(de.ugoe.cs.cpdp.eval.ExperimentResult) */ @Override public void addResult(ExperimentResult result) { StringBuilder sql = new StringBuilder(); sql.append("INSERT INTO crosspare.results VALUES (NULL,"); sql.append("\'" + result.getConfigurationName() + "\',"); sql.append("\'" + result.getProductName() + "\',"); sql.append("\'" + result.getClassifier() + "\',"); sql.append(result.getSizeTestData() + ","); sql.append(result.getSizeTrainingData() + ","); sql.append(result.getSuccHe() + ","); sql.append(result.getSuccZi() + ","); sql.append(result.getSuccG75() + ","); sql.append(result.getSuccG60() + ","); sql.append(result.getError() + ","); sql.append(result.getRecall() + ","); sql.append(result.getPrecision() + ","); sql.append(result.getFscore() + ","); sql.append(result.getGscore() + ","); sql.append(result.getMcc() + ","); sql.append(result.getAuc() + ","); sql.append(result.getAucec() + ","); sql.append(result.getTpr() + ","); sql.append(result.getTnr() + ","); sql.append(result.getFpr() + ","); sql.append(result.getFnr() + ","); sql.append(result.getTp() + ","); sql.append(result.getFn() + ","); sql.append(result.getTn() + ","); sql.append(result.getFp() + ");"); Statement stmt; try { stmt = connectionPool.getConnection().createStatement(); stmt.executeUpdate(sql.toString().replace("NaN", "NULL")); } catch (SQLException e) { Console.printerr("Problem with MySQL connection: "); Console.printerr("SQLException: " + e.getMessage()); Console.printerr("SQLState: " + e.getSQLState()); Console.printerr("VendorError: " + e.getErrorCode()); return; } } /* * (non-Javadoc) * * @see de.ugoe.cs.cpdp.eval.IResultStorage#containsResult(java.lang.String, java.lang.String) */ @Override public boolean containsResult(String experimentName, String productName) { String sql = "SELECT COUNT(*) as cnt FROM crosspare.results WHERE configurationName=\'" + experimentName + "\' AND productName=\'" + productName + "\';"; Statement stmt; boolean contained = false; try { stmt = connectionPool.getConnection().createStatement(); ResultSet results = stmt.executeQuery(sql); results.next(); int count = results.getInt("cnt"); contained = count > 0; } catch (SQLException e) { Console.printerr("Problem with MySQL connection: \n"); Console.printerr("SQLException: " + e.getMessage() + "\n"); Console.printerr("SQLState: " + e.getSQLState() + "\n"); Console.printerr("VendorError: " + e.getErrorCode() + "\n"); Console.printerr("\nskipping product since we could not check if the results is available"); contained = true; } return contained; } }